SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:3Tue Dec 13 2016 11:16:35 GMT+0100 (CET)

proteinLength

235

geneLength

705

Gene

Coordinates

3,005,122 → 3,005,829

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A173 (ytmM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/173 NBRP B. subtilis, Japan]

1A948 ( ''tcyM''::''kan''), [Pubmed|15262924], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A948&Search=1A948 BGSC]

1A948 ( ''tcyM''::''kan''), [Pubmed|15262924], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A948&Search=1A948 BGSC]

aminos

MQFDFPFIVSAMKEMVKTIPLTLMMAVLPIVFGFLVALGNIIVRIFRIKGLVACSRFYVSFFRSTPAILHIMLIYLGIPPVADQVSSFFHLGWSANEIPVSMFVIMALSLTAGAYLTEIIRSGILAMDTGQVEAAYSIGLTYSQTFRRVILPQALKVSIPNFTNLGIGFLHTTSIAAIVAVPEITGTATIVASDNYAFLEAFIGAAIIYWVLTLILESANGVLERKAARFQGGTL

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|biosynthesis/ acquisition of amino acids], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,005,122 -> 3,005,829

The protein

[SW|Interactions]

[[protein|TcyN]]-([[protein|TcyL]]-[[protein|TcyM]])-([[protein|TcyJ]]-[[protein|TcyK]]) [Pubmed|10092453]

Expression and Regulation

Operon

''[[protein|snaA]]-[[protein|tcyJ]]-[[protein|tcyK]]-[[protein|tcyL]]-[[protein|tcyM]]-[[protein|tcyN]]-[[protein|cmoO]]-[[protein|cmoI]]-[[protein|cmoJ]]-[[protein|ribR]]-[[protein|sndA]]-[[protein|ytnM]]'' [Pubmed|15668000]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|15272571]

Expression and Regulation

Regulation

repressed in the presence of cysteine ([[protein|CymR]]) [Pubmed|16109943]

induced in the presence of S-methyl-cysteine ([[protein|AscR]]) [Pubmed|23944997]

Expression and Regulation

Regulatory mechanism

[[protein|CymR]]: transcription repression [Pubmed|16109943]

[[protein|AscR]]: transcription activation [Pubmed|16109943]